Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818197.1_cds_XP_016499529.1_13442
CDS Infomation

[gene=LOC107818104] [db_xref=GeneID:107818104] [protein=calcium-dependent protein kinase 1-like] [protein_id=XP_016499529.1] [location=join(9781..10582,11374..11517,12691..12843,13320..13435,13540..13707,14075..14299,15181..15306)] [gbkey=CDS]
Sequence

ATGGGGAACACTTGTGTAGGACCAAGTATTTCAAAAAATGGAATCTTTCAATCAGTTTCA
GCAGCAATGTGGCGATCCCGGTCGCCCGATGACACTGCGTCCACCACTAATGGTGAAAGT
GCTAGAATTGAAACACCAATTTCCGTTAATGAACCTGATTCACCTTTGCCAGTTCAAGAG
CCACCGGAGCAAATGACAATGCCCAAGTCAGAAAAGAAAGAAGAGGAACAACAACCAAAA
AAGCCCAAAAAGCCTGCTGAAATGAAGAGGGTGTCAAGTGCTGGCCTTAGGACTGATTCT
GTGTTACAAAAGAAAACTGGCAACTTAAAGGAGTTTTTCAGTATAGGAAAGAAATTAGGA
CAAGGGCAATTTGGAACTACATTTAAATGTGTCGAAAAGGCAACAGGGAAGGAATATGCT
TGCAAGTCGATTGCCAAGAGGAAGTTGTTAACAGATGATGATGTGGAAGATGTTAGAAGG
GAAGTACAGATAATGCACCATTTGGCGGGGCATCCTCATGTTATATCGATAAAAGGTGCT
TATGAGGATGCTGTAGCTGTTCATGTTGTTATGGAGTTCTGTGCTGGCGGTGAGCTTTTC
GATAGGATTATTCAACGGGGACACTATACTGAAAGAAAAGCAGCTGAGCTTACCCGGACT
ATTGTTGGAGTTGTAGAAGCTTGTCATTCTCTTGGCGTCATGCATCGTGATCTTAAGCCT
GAAAATTTTCTTTTTGTTGATCAGAAGGAGGATTCACTTCTCAAAACAATTGACTTTGGG
TTGTCAATATTCTTCAAACCAGGTGACAGATTTACTGATGTTGTTGGCAGTCCATATTAT
GTTGCACCAGAAGTTCTCCGAAAACGTTATGGTCCTGAAGCTGATGTTTGGAGTGCTGGT
GTAATTATCTACATCTTATTAAGTGGAGTACCTCCTTTCTGGGCTGAAAATGAGCAAGGA
ATATTTGAGCAAGTCCTGCACGGTGATCTTGACTTCACGTCAGACCCATGGCCAAGTATT
TCAGAAGGTGCAAAAGACTTGATGAGGAGAATGCTTGTTCGAGATCCAAGAAGACGTTTA
ACTGCACATGAAGTTTTATGCCATCCTTGGGTTCAAGTTGATGGTGTGGCTCCCGATAAG
CCTCTGGATTCTGCAGTTCTGAGTAGAATGAAGCAATTTTCTGCAATGAACAAGCTCAAG
AAAATGGCTTTGAGAGTCATTGCCGATAGCCTATCCGAAGAAGAAATTGCTGGTCTAAAA
GAAATGTTCAAGATGATAGACACAGATAATAGTGGTCAAATAACTTTTGAGGAGCTCAAA
GATGGATTAAAAAGATTTGGCTCTAATCTGAAGGAGTCCGAGATCTATGATCTTATGCAG
GCGGCTGATGTTGATAACAGTGGAACAATTGATTATGGTGAATTTATAGCTGCAACATTA
CATATGAATAAGATTGAAAGACAAGATCATCTTTTTGCTGCTTTCTCTTACTTCGATAAA
GATGGGAGTGGCTACATCACTGCAGACGAGCTTCAACAAGCTTGTGAAGAATTTGGCATT
GGGGATGTCCGCATGGAAGAAATGATCAGAGAAGCTGACCAAGACAATGACGGGCGCATT
GACTACAATGAGTTTGTTGCCATGATGCAAAAGGGAAATCCAGTGCTTGGTGGTGGCAAG
AAAGGTCTAGAGCATAGTTTCAGCATTGGATTCAGAGAAGCACTAAAACTATAG

Peptide Sequence

PEP ID

XP_016499529.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 1-like [Nicotiana tabacum]
Sequence

MGNTCVGPSISKNGIFQSVSAAMWRSRSPDDTASTTNGESARIETPISVNEPDSPLPVQE
PPEQMTMPKSEKKEEEQQPKKPKKPAEMKRVSSAGLRTDSVLQKKTGNLKEFFSIGKKLG
QGQFGTTFKCVEKATGKEYACKSIAKRKLLTDDDVEDVRREVQIMHHLAGHPHVISIKGA
YEDAVAVHVVMEFCAGGELFDRIIQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLKP
ENFLFVDQKEDSLLKTIDFGLSIFFKPGDRFTDVVGSPYYVAPEVLRKRYGPEADVWSAG
VIIYILLSGVPPFWAENEQGIFEQVLHGDLDFTSDPWPSISEGAKDLMRRMLVRDPRRRL
TAHEVLCHPWVQVDGVAPDKPLDSAVLSRMKQFSAMNKLKKMALRVIADSLSEEEIAGLK
EMFKMIDTDNSGQITFEELKDGLKRFGSNLKESEIYDLMQAADVDNSGTIDYGEFIAATL
HMNKIERQDHLFAAFSYFDKDGSGYITADELQQACEEFGIGDVRMEEMIREADQDNDGRI
DYNEFVAMMQKGNPVLGGGKKGLEHSFSIGFREALKL

Transcript Sequence

Gene sequence data has not been registered.